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  "Title": "Processing 'Gen5' 2.06 Exported Data",
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  "Author": "Yanxian Lin [aut, cre]",
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  "Description": "A collection of functions for processing 'Gen5' 2.06\nexported data. 'Gen5' is an essential data analysis software\nfor BioTek plate readers\n<https://www.biotek.com/products/software-robotics-software/gen5-microplate-reader-and-imager-software/>.\nThis package contains functions for data cleaning, modeling and\nplotting using exported data from 'Gen5' version 2.06. It\nexports technically correct data defined in (Edwin de Jonge and\nMark van der Loo (2013)\n<https://cran.r-project.org/doc/contrib/de_Jonge+van_der_Loo-Introduction_to_data_cleaning_with_R.pdf>)\nfor customized analysis. It contains Boltzmann fitting for\ngeneral kinetic analysis. See\n<https://www.github.com/yanxianUCSB/gen5helper> for more\ninformation, documentation and examples.",
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